petab_select.petab

Helper methods for working with PEtab problems.

Functions

get_petab_parameters(petab_problem[, as_lists])

Convert PEtab problem parameters to the format in model space files.

petab_select.petab.get_petab_parameters(petab_problem, as_lists=False)[source]

Convert PEtab problem parameters to the format in model space files.

Parameters:

petab_problem (Problem) – The PEtab problem.
as_lists (bool) – Each value will be provided inside a list object, similar to the format for multiple values for a parameter in a model subspace.

Return type:

dict[str, Union[float, Literal['estimate'], list[Union[float, Literal['estimate']]]]]

Returns:

Keys are parameter IDs, values are the nominal values for fixed parameters, or ESTIMATE for estimated parameters.